Masters in Hospital Management · Epidemiology for managers

Forty staff are sick by Tuesday evening. What do you do first?

Outbreak investigation, followed one step at a time through a single hospital outbreak

AIIMS Bhopal · 60 minutes

An outbreak is a management problem before it is a lab result

When staff or patients fall sick together, the manager feels it first.

Beds

Wards close or stop admitting. Surgery lists get cancelled.

Staff

Rosters collapse overnight. Sick staff must stay away from patients.

Patients

Vulnerable patients can be infected by staff, food or equipment.

Trust

Media, regulators and families ask one question: who knew, and when?

The epidemiologist finds the cause. The manager makes the response possible.

When does "a few sick people" become an outbreak?

Ask the room first. Then compare with this.

Outbreak

More cases than expected, in a given place, population and time.

Baseline

The usual number of cases. You cannot say "more" without knowing "usual".

Cluster

Cases grouped in place or time. It may or may not be above baseline.

Two cases of a disease you never see can be an outbreak. Twenty cases of the common cold may not be.

Tuesday, 9 am: twenty-nine staff have called in sick

29staff off sick with diarrhoea
7seen in Emergency overnight
2 to 3usual staff sick calls in a week

Nurses, residents, housekeeping, security and office staff. Nine different departments. Most say it started last night.

The nursing superintendent wants to know by 10 am whether to cancel today's surgery lists.

Illustrative figures, constructed for teaching.

Before anything else: is this outbreak real?

Twenty-nine against a usual two or three looks real. What else could make the numbers jump?

Check the diagnosis

Talk to the sick. See the clinical notes. Send stool samples today. Is it one illness or several?

Rule out a pseudo-outbreak

A new lab test, a new reporting rule, a festival leave pattern, or lab contamination can all create cases on paper.

Here: same symptoms, same night, far above baseline. Treat it as real and keep checking.

The steps are a checklist, not a queue

1 Prepare

Team, authority, lab contact

2 Confirm

Above baseline?

3 Verify

Diagnosis, samples

4 Define

Who counts as a case

5 Find cases

Line list

6 Describe

Time, place, person

7 Suspect

Form a hypothesis

8 Test

Compare ill and well

9 Confirm source

Lab, environment

10 Control

From day one

11 Watch

Keep counting

12 Tell

Report, communicate

Adapted from CDC, Principles of Epidemiology in Public Health Practice, 3rd ed., Lesson 6.

Who counts as a case? Write it before you count

A case definition has four parts. Try drafting ours.

PartOur working definition
PersonAny member of hospital staff
PlaceWorking at this hospital
TimeOnset between Monday 12:00 and Wednesday 12:00
ClinicalThree or more loose stools in 24 hours

Add a lab tier later: confirmed (stool grows the organism), probable (meets the clinical definition, no lab result).

Do not put the suspected food in the definition. You cannot then test whether the food caused it.

Everything starts from a line list

One row per case, one column per fact. Here are the first 8 of 48 rows.

IDAgeSexJobDepartmentOnsetStoolsFeverAdmittedStool culture
C00133MResident doctorSurgeryMon 18:304YesNoNot sent
C00253MHousekeepingNICUMon 20:158YesYesNot sent
C00345FStaff nurseOT complexMon 20:454YesNoNo growth
C00438MLab technicianLaboratoryMon 23:308YesYesSalmonella
C00554FStaff nurseOT complexMon 23:306NoNoSalmonella
C00624FResident doctorEmergencyTue 01:156YesNoSalmonella
C00751MAdmin staffAdmin blockTue 01:304YesNoNot sent
C00822FAdmin staffAdmin blockTue 01:457YesNoNo growth

Every table and graph in this investigation is built from these rows.

Illustrative figures, constructed for teaching.

What does this shape tell you?

5 10 0 Sun 12:00 Mon 00:00 Mon 12:00 Tue 00:00 Tue 12:00 Wed 00:00 Wed 12:00 Each box is one case. Onset of diarrhoea, 4-hour intervals.

Illustrative figures, constructed for teaching. 48 cases.

One sharp peak points to one shared exposure

Likely exposure 12 to 36 h before 5 10 0 Median onset, Tue 07:30 Mon lunch Sun 12:00 Mon 00:00 Mon 12:00 Tue 00:00 Tue 12:00 Wed 00:00 Wed 12:00 Each box is one case. Onset of diarrhoea, 4-hour intervals.

Salmonella usually takes 12 to 36 hours to cause symptoms (range 6 to 72). Count back from the median onset: the exposure falls between Sunday evening and Monday evening. Monday lunch sits inside.

Incubation period: Heymann DL, ed. Control of Communicable Diseases Manual, 21st ed. APHA Press, 2022.

The wards are not the link. What the staff share is

DepartmentCases
Surgery10
Medicine9
Admin block7
Emergency6
OT complex5
Laboratory, Main gate4 each
NICU, Paediatrics3

Place: cases in nine departments, with no single ward standing out.

Person: all jobs, ages 22 to 56, day shift workers.

Night staff and people who bring lunch from home are almost untouched.

Illustrative figures, constructed for teaching.

Our suspect is Monday lunch. How do we test it?

A hypothesis is a testable guess about source and route. Ours: something served at Monday lunch in the staff canteen.

Cohort study, used here

The canteen's meal tokens list 240 people who ate. Interview them all about what they ate, ill or well. We reached 180.

Case-control study

When you cannot list everyone exposed, compare cases with similar people who stayed well.

Both designs do the same thing: compare the ill with the well.

Illustrative figures, constructed for teaching.

Attack rate: the share of exposed people who fell ill

Attack rate= people who ate the dish and fell illall people who ate the dish × 100

It is a proportion over the whole outbreak, not a rate per unit of time. The name is historical.

Chicken biryani= 4296 =43.8%

Compute it twice for every dish: once for those who ate it, once for those who did not.

Illustrative figures, constructed for teaching.

Which dish would you take off the menu?

DishAte: ill / totalAttack rateDid not eat: ill / totalAttack rate
Chicken biryani42 / 9643.8%6 / 847.1%
Raita38 / 11034.5%10 / 7014.3%
Veg pulao8 / 8010.0%40 / 10040.0%
Dal40 / 15026.7%8 / 3026.7%
Salad20 / 7028.6%28 / 11025.5%
Gulab jamun17 / 6028.3%31 / 12025.8%

Look for a high attack rate among eaters and a low one among non-eaters.

Illustrative figures, constructed for teaching. 180 people interviewed, 48 cases.

Eating the biryani carried six times the risk

Relative risk= 43.8%7.1% =6.1

Attack rate in eaters divided by attack rate in non-eaters. 1 means no difference.

DishRelative risk
Chicken biryani6.1suspect
Raita2.4check
Veg pulao0.25check
Dal1.0clear
Salad1.1clear
Gulab jamun1.1clear

Biryani: relative risk 6.1, 95% confidence interval 2.7 to 13.7. And 42 of the 48 cases ate it.

Illustrative figures, constructed for teaching.

Raita looks guilty too. Is it?

Most people who took raita also took biryani. Split the table by biryani and look again.

GroupRaita: ill / totalAttack rateNo raita: ill / totalAttack rateRelative risk
Ate biryani37 / 8543.5%5 / 1145.5%1.0
No biryani1 / 254.0%5 / 598.5%0.5

Within each group, raita makes no difference. It rode along with the biryani.

This is confounding: a third factor linked to both the exposure and the illness creates a false association.

Illustrative figures, constructed for teaching.

Your turn: run the investigation on the full data

Lab 1: Case definition and epi curve

Loosen or tighten the case definition. Watch the case count, the curve, and the biryani relative risk change.

Open Lab 1

Lab 2: Food attack rates

Pick any dish, see its 2 by 2 table and relative risk, then split by biryani to find the confounder.

Open Lab 2

On your phone: drpakhare.github.io/mhm-outbreak-investigation

In pairs, five minutes. Find one case definition that makes the biryani look less guilty, and explain why.

Both labs use the same 180 interviews. Illustrative figures, constructed for teaching.

A strong association is not yet proof

The numbers point at the biryani. Three other lines of evidence must agree.

Laboratory

Salmonella in 19 of 23 stool samples. Same organism in the leftover biryani sample.

Kitchen

Chicken cooked on Sunday night, left at room temperature for five hours, reheated on Monday.

Food handlers

Stool samples from all kitchen staff. One cook had mild diarrhoea last week.

Epidemiology, lab and kitchen findings tell the same story. Now the conclusion is safe.

Illustrative figures, constructed for teaching.

You act on day one, not after the analysis

WhenActionWho decides
Tuesday, 10 amStop serving leftovers. Keep samples of every Monday dish.Manager, canteen contractor
Tuesday, 10 amSick staff stay off patient care and food handling until 48 hours after symptoms stop.Infection control, nursing
Tuesday, noonEmergency staff roster. Postpone non-urgent surgery lists if staffing is short.Manager, medical superintendent
WednesdayKitchen cleaned, cooking and holding temperatures logged, cook excluded until cleared.Food safety officer

Waiting for proof while the source is still active is the most common and costly mistake.

Exclusion period as per the hospital infection control policy. Timeline illustrative.

Who needs to hear, and in what order?

Inside, first hours

Medical superintendent, Hospital Infection Control Committee, heads of affected departments.

Public health, same day

District Surveillance Unit under IDSP, the Integrated Disease Surveillance Programme.

Staff and patients

What happened, what to do if unwell, who to call. Plain and short.

Media

One spokesperson. Facts, actions taken, next update time.

Silence gets filled by rumour. Tell people early, tell them what you know and what you do not know yet.

Same steps, inside the NICU

A healthcare-associated infection is one that was not present or incubating when the patient was admitted.

Canteen outbreakNICU cluster of bloodstream infections
BaselineStaff sick leave recordsMonthly infection surveillance rates
Curve shapeOne sharp peakSlow build over weeks, continuing source
Likely sourcesA dish, a cookHands, fluids, equipment, a sink
Study designCohort, everyone listedOften case-control, few cases
ControlStop the dishCohort babies and staff, hand hygiene audit, environmental cultures

What must exist before the next outbreak?

Before

A named outbreak team with authority. Baseline surveillance data. A written outbreak policy. Lab and IDSP contacts.

During

Daily team meeting. One line list. Decision log with times. Staff roster backup. One spokesperson.

After

Written report. Fixes assigned with owners and dates. Follow-up audit.

The quality of your response on Tuesday was decided months earlier.

An outbreak ends with a report, not with relief

The outbreak is over when cases return to baseline for twice the longest incubation period. For Salmonella, about six days.

The report says

What happened, how we know, what we did and when, what it cost, and what we are changing.

What we changed

No next-day reheating of cooked meat. Temperature logs checked weekly. Food handler illness reporting with paid sick leave.

If nothing in the system changes, the report was only paperwork.

Three things to carry out of this room

An outbreak is more cases than expected. You need a baseline to know.

Compare the ill with the well. The line list, the epi curve and the attack rate table do this.

Act on a reasonable suspicion. Control and communication start on day one.

Sources and further reading

  1. Centers for Disease Control and Prevention. Principles of Epidemiology in Public Health Practice, 3rd ed. Lesson 6: Investigating an outbreak. Atlanta: CDC; 2012.
  2. Rasmussen SA, Goodman RA, eds. The CDC Field Epidemiology Manual. New York: Oxford University Press; 2019.
  3. Reingold AL. Outbreak investigations: a perspective. Emerg Infect Dis. 1998;4(1):21-27. PMID 9452395.
  4. Heymann DL, ed. Control of Communicable Diseases Manual, 21st ed. Washington DC: APHA Press; 2022. Salmonellosis.
  5. National Centre for Disease Control. Integrated Disease Surveillance Programme (IDSP). idsp.mohfw.gov.in

The canteen outbreak, its line list and all its numbers are illustrative, constructed for teaching.

Prepared at AIIMS Bhopal with Claude (Anthropic) as drafting and coding assistant.